GrippeCanadaV3, Main, Exploration, bibRecord, 000373

Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010.

Identifieur interne : 000373 ( Main/Exploration ); précédent : 000372; suivant : 000374

Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010.

Auteurs : Adriana Peci [Canada] ; Anne-Luise Winter ; Jonathan B. Gubbay ; Danuta M. Skowronski ; Elizabeth I. Balogun ; Cedric De Lima ; Natasha S. Crowcroft ; Anu Rebbapragada

Source :

Influenza and other respiratory viruses [ 1750-2659 ] ; 2013.

RBID : pubmed:22883216

Descripteurs français

KwdFr :
- Adolescent, Adulte, Adulte d'âge moyen, Co-infection (virologie), Co-infection (épidémiologie), Enfant, Enfant d'âge préscolaire, Facteurs de risque, Femelle, Grippe humaine (), Humains, Infections communautaires (virologie), Infections communautaires (épidémiologie), Infections de l'appareil respiratoire (virologie), Infections de l'appareil respiratoire (épidémiologie), Jeune adulte, Mâle, Nourrisson, Nouveau-né, Ontario (épidémiologie), Prévalence, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire, Virus (), Virus (isolement et purification).
MESH :
- isolement et purification : Virus.
- virologie : Co-infection, Infections communautaires, Infections de l'appareil respiratoire.
- épidémiologie : Co-infection, Infections communautaires, Infections de l'appareil respiratoire, Ontario.
- Adolescent, Adulte, Adulte d'âge moyen, Enfant, Enfant d'âge préscolaire, Facteurs de risque, Femelle, Grippe humaine, Humains, Jeune adulte, Mâle, Nourrisson, Nouveau-né, Prévalence, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire, Virus.

English descriptors

KwdEn :
- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Coinfection (epidemiology), Coinfection (virology), Community-Acquired Infections (epidemiology), Community-Acquired Infections (virology), Female, Humans, Infant, Infant, Newborn, Influenza, Human (complications), Male, Middle Aged, Molecular Diagnostic Techniques, Ontario (epidemiology), Prevalence, Respiratory Tract Infections (epidemiology), Respiratory Tract Infections (virology), Risk Factors, Viruses (classification), Viruses (isolation & purification), Young Adult.
MESH :
- geographic , epidemiology : Ontario.
- classification : Viruses.
- complications : Influenza, Human.
- epidemiology : Coinfection, Community-Acquired Infections, Respiratory Tract Infections.
- isolation & purification : Viruses.
- virology : Coinfection, Community-Acquired Infections, Respiratory Tract Infections.
- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Female, Humans, Infant, Infant, Newborn, Male, Middle Aged, Molecular Diagnostic Techniques, Prevalence, Risk Factors, Young Adult.

Abstract

BACKGROUND

Respiratory viruses are known to cocirculate but this has not been described in detail during an influenza pandemic.

OBJECTIVES

To describe respiratory viruses, including co-infection and associated attributes such as age, sex or comorbidity, in patients presenting with influenza-like illness to a community sentinel network, during the pandemic A(H1N1)pdm09 in Ontario, Canada.

METHODS

Respiratory samples and epidemiologic details were collected from 1018 patients with influenza-like illness as part of respiratory virus surveillance and a multiprovincial case-control study of influenza vaccine effectiveness.

RESULTS

At least one virus was detected in 668 (65·6%) of 1018 samples; 512 (50·3%) had single infections and 156 (15·3%) co-infections. Of single infections, the most common viruses were influenza A in 304 (59·4%) samples of which 275 (90·5%) were influenza A(H1N1)pdm09, and enterovirus/rhinovirus in 149 (29·1%) samples. The most common co-infections were influenza A and respiratory syncytial virus B, and influenza A and enterovirus/rhinovirus. In multinomial logistic regression analyses adjusted for age, sex, comorbidity, and timeliness of sample collection, single infection was less often detected in the elderly and co-infection more often in patients <30 years of age. Co-infection, but not single infection, was more likely detected in patients who had a sample collected within 2 days of symptom onset as compared to 3-7 days.

CONCLUSIONS

Respiratory viral co-infections are commonly detected when using molecular techniques. Early sample collection increases likelihood of detection of co-infection. Further studies are needed to better understand the clinical significance of viral co-infection.

DOI: 10.1111/j.1750-2659.2012.00418.x
PubMed: 22883216

Affiliations:

Canada

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000422
to stream Main, to step Curation: 000422

Le document en format XML

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<front><div type="abstract" xml:lang="en"><p><b>BACKGROUND</b>
</p>
<p>Respiratory viruses are known to cocirculate but this has not been described in detail during an influenza pandemic.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>OBJECTIVES</b>
</p>
<p>To describe respiratory viruses, including co-infection and associated attributes such as age, sex or comorbidity, in patients presenting with influenza-like illness to a community sentinel network, during the pandemic A(H1N1)pdm09 in Ontario, Canada.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>METHODS</b>
</p>
<p>Respiratory samples and epidemiologic details were collected from 1018 patients with influenza-like illness as part of respiratory virus surveillance and a multiprovincial case-control study of influenza vaccine effectiveness.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>RESULTS</b>
</p>
<p>At least one virus was detected in 668 (65·6%) of 1018 samples; 512 (50·3%) had single infections and 156 (15·3%) co-infections. Of single infections, the most common viruses were influenza A in 304 (59·4%) samples of which 275 (90·5%) were influenza A(H1N1)pdm09, and enterovirus/rhinovirus in 149 (29·1%) samples. The most common co-infections were influenza A and respiratory syncytial virus B, and influenza A and enterovirus/rhinovirus. In multinomial logistic regression analyses adjusted for age, sex, comorbidity, and timeliness of sample collection, single infection was less often detected in the elderly and co-infection more often in patients <30 years of age. Co-infection, but not single infection, was more likely detected in patients who had a sample collected within 2 days of symptom onset as compared to 3-7 days.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>CONCLUSIONS</b>
</p>
<p>Respiratory viral co-infections are commonly detected when using molecular techniques. Early sample collection increases likelihood of detection of co-infection. Further studies are needed to better understand the clinical significance of viral co-infection.</p>
</div>
</front>
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<DateCompleted><Year>2013</Year>
<Month>10</Month>
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<Month>11</Month>
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<Title>Influenza and other respiratory viruses</Title>
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<ArticleTitle>Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010.</ArticleTitle>
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<Abstract><AbstractText Label="BACKGROUND" NlmCategory="BACKGROUND">Respiratory viruses are known to cocirculate but this has not been described in detail during an influenza pandemic.</AbstractText>
<AbstractText Label="OBJECTIVES" NlmCategory="OBJECTIVE">To describe respiratory viruses, including co-infection and associated attributes such as age, sex or comorbidity, in patients presenting with influenza-like illness to a community sentinel network, during the pandemic A(H1N1)pdm09 in Ontario, Canada.</AbstractText>
<AbstractText Label="METHODS" NlmCategory="METHODS">Respiratory samples and epidemiologic details were collected from 1018 patients with influenza-like illness as part of respiratory virus surveillance and a multiprovincial case-control study of influenza vaccine effectiveness.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">At least one virus was detected in 668 (65·6%) of 1018 samples; 512 (50·3%) had single infections and 156 (15·3%) co-infections. Of single infections, the most common viruses were influenza A in 304 (59·4%) samples of which 275 (90·5%) were influenza A(H1N1)pdm09, and enterovirus/rhinovirus in 149 (29·1%) samples. The most common co-infections were influenza A and respiratory syncytial virus B, and influenza A and enterovirus/rhinovirus. In multinomial logistic regression analyses adjusted for age, sex, comorbidity, and timeliness of sample collection, single infection was less often detected in the elderly and co-infection more often in patients <30 years of age. Co-infection, but not single infection, was more likely detected in patients who had a sample collected within 2 days of symptom onset as compared to 3-7 days.</AbstractText>
<AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">Respiratory viral co-infections are commonly detected when using molecular techniques. Early sample collection increases likelihood of detection of co-infection. Further studies are needed to better understand the clinical significance of viral co-infection.</AbstractText>
<CopyrightInformation>© 2012 John Wiley & Sons Ltd.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Peci</LastName>
<ForeName>Adriana</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Public Health Ontario, Toronto, ON, Canada.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Winter</LastName>
<ForeName>Anne-Luise</ForeName>
<Initials>AL</Initials>
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<Author ValidYN="Y"><LastName>Gubbay</LastName>
<ForeName>Jonathan B</ForeName>
<Initials>JB</Initials>
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<Author ValidYN="Y"><LastName>Skowronski</LastName>
<ForeName>Danuta M</ForeName>
<Initials>DM</Initials>
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<Author ValidYN="Y"><LastName>Balogun</LastName>
<ForeName>Elizabeth I</ForeName>
<Initials>EI</Initials>
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<Author ValidYN="Y"><LastName>De Lima</LastName>
<ForeName>Cedric</ForeName>
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<ForeName>Natasha S</ForeName>
<Initials>NS</Initials>
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<Initials>A</Initials>
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<Language>eng</Language>
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<MeshHeading><DescriptorName UI="D007231" MajorTopicYN="N">Infant, Newborn</DescriptorName>
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<MeshHeading><DescriptorName UI="D025202" MajorTopicYN="N">Molecular Diagnostic Techniques</DescriptorName>
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<MeshHeading><DescriptorName UI="D012141" MajorTopicYN="N">Respiratory Tract Infections</DescriptorName>
<QualifierName UI="Q000453" MajorTopicYN="Y">epidemiology</QualifierName>
<QualifierName UI="Q000821" MajorTopicYN="N">virology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012307" MajorTopicYN="N">Risk Factors</DescriptorName>
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<MeshHeading><DescriptorName UI="D014780" MajorTopicYN="N">Viruses</DescriptorName>
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<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
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Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010.

Community-acquired respiratory viruses and co-infection among patients of Ontario sentinel practices, April 2009 to February 2010.

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